ENSG00000163811


Homo sapiens

Features
Gene ID: ENSG00000163811
  
Biological name :WDR43
  
Synonyms : Q15061 / WDR43 / WD repeat domain 43
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p23.2
Gene start: 28894643
Gene end: 28948222
  
Corresponding Affymetrix probe sets: 214662_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000296126
Ensembl peptide - ENSP00000415355
Ensembl peptide - ENSP00000390363
Ensembl peptide - ENSP00000384302
NCBI entrez gene - 23160     See in Manteia.
OMIM - 616195
RefSeq - NM_015131
RefSeq Peptide - NP_055946
swissprot - C9JEE7
swissprot - C9IZK7
swissprot - C9JH61
swissprot - Q15061
Ensembl - ENSG00000163811
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr43ENSDARG00000077264Danio rerio
 WDR43ENSGALG00000032529Gallus gallus
 Wdr43ENSMUSG00000041057Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR007148  Small-subunit processome, Utp12
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0045943 positive regulation of transcription by RNA polymerase I IMP
 biological_processGO:2000234 positive regulation of rRNA processing IMP
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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