ENSMUSG00000041057


Mus musculus

Features
Gene ID: ENSMUSG00000041057
  
Biological name :Wdr43
  
Synonyms : Q6ZQL4 / Wdr43 / WD repeat domain 43
  
Possible biological names infered from orthology : Q15061
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: E1.3
Gene start: 71616215
Gene end: 71659031
  
Corresponding Affymetrix probe sets: 10446693 (MoGene1.0st)   1428389_s_at (Mouse Genome 430 2.0 Array)   1428390_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000048337
NCBI entrez gene - 72515     See in Manteia.
MGI - MGI:1919765
RefSeq - NM_175639
RefSeq Peptide - NP_783570
swissprot - Q6ZQL4
Ensembl - ENSMUSG00000041057
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr43ENSDARG00000077264Danio rerio
 WDR43ENSGALG00000032529Gallus gallus
 WDR43ENSG00000163811Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR007148  Small-subunit processome, Utp12
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0045943 positive regulation of transcription by RNA polymerase I IEA
 biological_processGO:2000234 positive regulation of rRNA processing IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus ISS
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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