ENSDARG00000077291


Danio rerio

Features
Gene ID: ENSDARG00000077291
  
Biological name :rps2
  
Synonyms : ribosomal protein S2 / rps2
  
Possible biological names infered from orthology : Gm8225 / P15880 / P25444
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 18398876
Gene end: 18403179
  
Corresponding Affymetrix probe sets: Dr.1126.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117673
Ensembl peptide - ENSDARP00000117756
Ensembl peptide - ENSDARP00000101605
NCBI entrez gene - 406565     See in Manteia.
RefSeq - XM_005163871
RefSeq Peptide - NP_998444
swissprot - E9QDR0
swissprot - Q6NWC3
ZFIN ID - ZDB-GENE-040426-2454
Ensembl - ENSDARG00000077291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPS2ENSGALG00000005490Gallus gallus
 RPS2ENSG00000140988Homo sapiens
 Gm8225ENSMUSG00000068604Mus musculus
 Rps2ENSMUSG00000044533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000851  Ribosomal protein S5
 IPR005324  Ribosomal protein S5, C-terminal
 IPR005711  Ribosomal protein S5, eukaryotic/archaeal
 IPR013810  Ribosomal protein S5, N-terminal
 IPR014721  Ribosomal protein S5 domain 2-type fold, subgroup
 IPR018192  Ribosomal protein S5, N-terminal, conserved site
 IPR020568  Ribosomal protein S5 domain 2-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
RMTs methylate histone arginines
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Protein methylation
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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