ENSGALG00000005490


Gallus gallus

Features
Gene ID: ENSGALG00000005490
  
Biological name :RPS2
  
Synonyms : ribosomal protein S2 / RPS2
  
Possible biological names infered from orthology : Gm8225 / P15880 / P25444
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 6179190
Gene end: 6181856
  
Corresponding Affymetrix probe sets: Gga.4573.2.S1_s_at (Chicken Array)   Gga.4573.4.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008802
Ensembl peptide - ENSGALP00000064326
Ensembl peptide - ENSGALP00000062386
Ensembl peptide - ENSGALP00000061530
Ensembl peptide - ENSGALP00000061400
NCBI entrez gene - 416544     See in Manteia.
RefSeq - NM_001277164
RefSeq Peptide - NP_001264093
swissprot - E1C4M0
swissprot - A0A1L1RZP1
swissprot - A0A1L1RU84
swissprot - A0A1L1RRG7
Ensembl - ENSGALG00000005490
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps2ENSDARG00000077291Danio rerio
 RPS2ENSG00000140988Homo sapiens
 Gm8225ENSMUSG00000068604Mus musculus
 Rps2ENSMUSG00000044533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000851  Ribosomal protein S5
 IPR005324  Ribosomal protein S5, C-terminal
 IPR005711  Ribosomal protein S5, eukaryotic/archaeal
 IPR013810  Ribosomal protein S5, N-terminal
 IPR014720  Double-stranded RNA-binding domain
 IPR014721  Ribosomal protein S5 domain 2-type fold, subgroup
 IPR018192  Ribosomal protein S5, N-terminal, conserved site
 IPR020568  Ribosomal protein S5 domain 2-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0051443 positive regulation of ubiquitin-protein transferase activity IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0017134 fibroblast growth factor binding IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
RMTs methylate histone arginines
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Protein methylation
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003958 PRMT3 / protein arginine methyltransferase 3 / O60678* / Q922H1* / protein arginine N-methyltransferase 3*  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr