ENSDARG00000077400


Danio rerio

Features
Gene ID: ENSDARG00000077400
  
Biological name :rbm10
  
Synonyms : rbm10 / RNA binding motif protein 10
  
Possible biological names infered from orthology : Mus musculus RNA binding motif protein 10 (Rbm10), transcript variant 4, mRNA. / P98175 / Q99KG3
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 827248
Gene end: 900795
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000148954
Ensembl peptide - ENSDARP00000101483
Ensembl peptide - ENSDARP00000119830
Ensembl peptide - ENSDARP00000121401
Ensembl peptide - ENSDARP00000146436
Ensembl peptide - ENSDARP00000148117
NCBI entrez gene - 101882554     See in Manteia.
swissprot - F1R4L1
swissprot - F1R9E9
swissprot - F1R9N7
ZFIN ID - ZDB-GENE-100922-245
Ensembl - ENSDARG00000077400
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBM10ENSG00000182872Homo sapiens
 Rbm10ENSMUSG00000031060Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rbm5 / RNA binding motif protein 5 / P52756* / Q91YE7* / RNA-binding protein 5 *ENSDARG0000009828031
rbm6 / RNA binding motif protein 6 / P78332*ENSDARG0000007706022


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001876  Zinc finger, RanBP2-type
 IPR013087  Zinc finger C2H2-type
 IPR033095  RNA-binding protein 10
 IPR034992  RNA-binding protein 10, RNA recognition motif 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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