ENSDARG00000077428


Danio rerio

Features
Gene ID: ENSDARG00000077428
  
Biological name :camta1a
  
Synonyms : calmodulin binding transcription activator 1a / camta1a
  
Possible biological names infered from orthology : A2A891 / calmodulin binding transcription activator 1 / CAMTA1 / Q9Y6Y1
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 30061364
Gene end: 30431333
  
Corresponding Affymetrix probe sets: Dr.12557.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126402
Ensembl peptide - ENSDARP00000149268
NCBI entrez gene - 797322     See in Manteia.
RefSeq - XM_009296996
RefSeq - XM_017353704
RefSeq - XM_021473715
swissprot - K7DY74
ZFIN ID - ZDB-GENE-090312-183
Ensembl - ENSDARG00000077428
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAMTA1ENSGALG00000039525Gallus gallus
 CAMTA1ENSG00000171735Homo sapiens
 A2A891ENSMUSG00000014592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
camta1b / calmodulin binding transcription activator 1b / CAMTA1* / Q9Y6Y1* / calmodulin binding transcription activator 1*ENSDARG0000000782461
camta2 / calmodulin binding transcription activator 2ENSDARG000000927993
camta1 / calmodulin binding transcription activator 1ENSDARG000001054350


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR002909  IPT domain
 IPR005559  CG-1 DNA-binding domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR020683  Ankyrin repeat-containing domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr