ENSG00000171735


Homo sapiens

Features
Gene ID: ENSG00000171735
  
Biological name :CAMTA1
  
Synonyms : calmodulin binding transcription activator 1 / CAMTA1 / Q9Y6Y1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p36.31
Gene start: 6785324
Gene end: 7769706
  
Corresponding Affymetrix probe sets: 1555370_a_at (Human Genome U133 Plus 2.0 Array)   213268_at (Human Genome U133 Plus 2.0 Array)   225692_at (Human Genome U133 Plus 2.0 Array)   225693_s_at (Human Genome U133 Plus 2.0 Array)   227328_at (Human Genome U133 Plus 2.0 Array)   241882_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000452319
Ensembl peptide - ENSP00000452184
Ensembl peptide - ENSP00000452505
Ensembl peptide - ENSP00000306522
Ensembl peptide - ENSP00000450530
Ensembl peptide - ENSP00000451388
Ensembl peptide - ENSP00000451443
Ensembl peptide - ENSP00000451510
Ensembl peptide - ENSP00000451720
Ensembl peptide - ENSP00000452024
NCBI entrez gene - 23261     See in Manteia.
OMIM - 611501
RefSeq - XM_017000781
RefSeq - XM_011541086
RefSeq - XM_011541087
RefSeq - XM_011541088
RefSeq - XM_011541089
RefSeq - XM_011541090
RefSeq - XM_017000773
RefSeq - XM_017000774
RefSeq - XM_017000775
RefSeq - XM_017000776
RefSeq - XM_017000777
RefSeq - XM_017000778
RefSeq - XM_017000779
RefSeq - NM_001195563
RefSeq - NM_001242701
RefSeq - NM_001349608
RefSeq - NM_015215
RefSeq - XM_011541083
RefSeq - XM_011541084
RefSeq - XM_011541085
RefSeq Peptide - NP_001229630
RefSeq Peptide - NP_001336537
RefSeq Peptide - NP_056030
RefSeq Peptide - NP_001182492
swissprot - H0YJV1
swissprot - H0YJY7
swissprot - A0A0C4DGL0
swissprot - G3V297
swissprot - Q9Y6Y1
swissprot - H0YJG5
swissprot - H0YJK7
swissprot - H0YJR7
Ensembl - ENSG00000171735
  
Related genetic diseases (OMIM): 614756 - Cerebellar ataxia, nonprogressive, with mental retardation, 614756
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 camta1aENSDARG00000077428Danio rerio
 camta1bENSDARG00000007824Danio rerio
 CAMTA1ENSGALG00000039525Gallus gallus
 A2A891ENSMUSG00000014592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CAMTA2 / O94983 / calmodulin binding transcription activator 2ENSG0000010850937


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR002110  Ankyrin repeat
 IPR002909  IPT domain
 IPR005559  CG-1 DNA-binding domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR020683  Ankyrin repeat-containing domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0050885 neuromuscular process controlling balance IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000276 Long face 
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 HP:0000307 Pointed chin 
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 HP:0000343 Long philtrum 
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 HP:0000414 Bulbous nose 
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 HP:0000445 Broad nose 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000490 Deep set eyes 
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 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
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 HP:0000729 Pervasive developmental disorder 
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 HP:0000750 Impaired language development 
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001348 Brisk reflexes 
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 HP:0002003 Large forehead 
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 HP:0002019 Constipation 
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 HP:0002080 Intention tremor "An oscillatory cerebellar ataxia that tends to be absent when the limbs are inactive and during the first part of voluntary movement but worsening as the movement continues and greater precision is required (e.g., in touching a target such as the patient s nose or a physician s finger)." [HPO:curators]
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002317 Unsteady gait 
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 HP:0002354 Memory impairment 
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 HP:0002470 Cerebellar ataxia, nonprogressive 
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 HP:0002536 Abnormal cortical gyration "An abnormality of the gyri (i.e., the ridges) of the cerebral cortex of the brain." [HPO:curators]
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 HP:0007256 Mild pyramidal signs 
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 HP:0011067 Mesiodens "The presence of a supernumerary tooth in the midline between the maxillary central incisors." [HPO:ibailleulforestier, pmid:18262485]
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 HP:0012433 Abnormal social behavior "An abnormality of actions or reactions of a person taking place during interactions with others." [HPO:probinson]
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 HP:0025191 Segmental myoclonic seizures 
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 HP:0025517 Hypoplastic hippocampus "Underdevelopment of the hippocampus." []
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 HP:0100540 Palpebral edema 
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 HP:0400005 Short ear "Median longitudinal ear length less than two SD above the mean determined by the maximal distance from the superior aspect to the inferior aspect of the external ear." [eom:2cff5ac9b681fc73, pmid:19152421]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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