ENSDARG00000077526


Danio rerio

Features
Gene ID: ENSDARG00000077526
  
Biological name :babam1
  
Synonyms : babam1 / BRISC and BRCA1 A complex member 1 / Q6AXK4
  
Possible biological names infered from orthology : AC010463.1 / Q3UI43 / Q9NWV8
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 6051287
Gene end: 6070192
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000015195
Ensembl peptide - ENSDARP00000136325
Ensembl peptide - ENSDARP00000133269
Ensembl peptide - ENSDARP00000108272
NCBI entrez gene - 445296     See in Manteia.
RefSeq - XM_017358217
RefSeq Peptide - NP_001003752
swissprot - A0A0R4I9A4
swissprot - A0A0R4IMN5
swissprot - Q6AXK4
swissprot - A0A0R4IIK1
ZFIN ID - ZDB-GENE-040808-6
Ensembl - ENSDARG00000077526
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038189Gallus gallus
 AC010463.1ENSG00000269307Homo sapiens
 BABAM1ENSG00000105393Homo sapiens
 Babam1ENSMUSG00000031820Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR026126  BRISC and BRCA1-A complex member 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006302 double-strand break repair ISS
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0010212 response to ionizing radiation ISS
 biological_processGO:0045739 positive regulation of DNA repair IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0070536 protein K63-linked deubiquitination ISS
 biological_processGO:0072425 signal transduction involved in G2 DNA damage checkpoint ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0070531 BRCA1-A complex IEA
 cellular_componentGO:0070552 BRISC complex IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Metalloprotease DUBs
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Processing of DNA double-strand break ends
G2/M DNA damage checkpoint


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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