ENSMUSG00000031820


Mus musculus

Features
Gene ID: ENSMUSG00000031820
  
Biological name :Babam1
  
Synonyms : Babam1 / BRISC and BRCA1-A complex member 1 / Q3UI43
  
Possible biological names infered from orthology : AC010463.1 / Q9NWV8
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: B3.3
Gene start: 71396861
Gene end: 71404619
  
Corresponding Affymetrix probe sets: 10572596 (MoGene1.0st)   1424073_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000002473
Ensembl peptide - ENSMUSP00000148639
NCBI entrez gene - 68251     See in Manteia.
MGI - MGI:1915501
RefSeq - XM_017312948
RefSeq - NM_026636
RefSeq - XM_017312947
RefSeq Peptide - NP_080912
swissprot - Q3UI43
swissprot - A0A1D5RM60
Ensembl - ENSMUSG00000031820
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 babam1ENSDARG00000077526Danio rerio
 ENSGALG00000038189Gallus gallus
 AC010463.1ENSG00000269307Homo sapiens
 BABAM1ENSG00000105393Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026126  BRISC and BRCA1-A complex member 1
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006302 double-strand break repair ISS
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0010212 response to ionizing radiation ISO
 biological_processGO:0045739 positive regulation of DNA repair IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0070536 protein K63-linked deubiquitination ISO
 biological_processGO:0071425 hematopoietic stem cell proliferation IMP
 biological_processGO:0072425 signal transduction involved in G2 DNA damage checkpoint ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0016604 nuclear body ISO
 cellular_componentGO:0070531 BRCA1-A complex IEA
 cellular_componentGO:0070552 BRISC complex IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Metalloprotease DUBs
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Nonhomologous End-Joining (NHEJ)
G2/M DNA damage checkpoint


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000052139 Babam2 / Q8K3W0 / BRISC and BRCA1-A complex member 2 / Q9NXR7*  / complex
 ENSMUSG00000112039 Gm5136 / Q7M757 / predicted gene 5136 / BRCC3* / P46736* / BRCA1/BRCA2-containing complex subunit 3*  / complex
 ENSMUSG00000032691 Nlrp3 / Q8R4B8 / NACHT, LRR and PYD domains-containing protein 3 / Q96P20* / NLR family pyrin domain containing 3*  / complex






 

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