ENSGALG00000038189


Gallus gallus

Features
Gene ID: ENSGALG00000038189
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AC010463.1 / BABAM1 / BRISC and BRCA1 A complex member 1 / Q3UI43 / Q9NWV8
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 3400027
Gene end: 3406095
  
Corresponding Affymetrix probe sets: GgaAffx.11154.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044869
Ensembl peptide - ENSGALP00000057526
Ensembl peptide - ENSGALP00000054832
Ensembl peptide - ENSGALP00000054509
Ensembl peptide - ENSGALP00000051649
NCBI entrez gene - 776677     See in Manteia.
RefSeq - XM_015300103
RefSeq - XM_015300104
RefSeq - XM_015300105
swissprot - A0A1D5PFT2
swissprot - A0A1D5PX35
swissprot - A0A1D5NWX6
swissprot - A0A1D5PPM9
swissprot - A0A1D5PNR5
Ensembl - ENSGALG00000038189
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 babam1ENSDARG00000077526Danio rerio
 AC010463.1ENSG00000269307Homo sapiens
 BABAM1ENSG00000105393Homo sapiens
 Babam1ENSMUSG00000031820Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026126  BRISC and BRCA1-A complex member 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045739 positive regulation of DNA repair IEA
 biological_processGO:0071425 hematopoietic stem cell proliferation IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0070531 BRCA1-A complex IEA
 cellular_componentGO:0070552 BRISC complex IEA
 molecular_functionGO:0004519 endonuclease activity IEA


Pathways (from Reactome)
Pathway description
Metalloprotease DUBs
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Nonhomologous End-Joining (NHEJ)
Processing of DNA double-strand break ends
G2/M DNA damage checkpoint


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr