ENSDARG00000077544


Danio rerio

Features
Gene ID: ENSDARG00000077544
  
Biological name :toe1
  
Synonyms : target of EGR1, exonuclease / toe1
  
Possible biological names infered from orthology : Q96GM8 / Q9D2E2 / Target of EGR1 protein 1
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 27379861
Gene end: 27385934
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116268
NCBI entrez gene - 568260     See in Manteia.
RefSeq - NM_001256682
RefSeq Peptide - NP_001243611
swissprot - B8A5U4
ZFIN ID - ZDB-GENE-070912-533
Ensembl - ENSDARG00000077544
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TOE1ENSGALG00000010228Gallus gallus
 TOE1ENSG00000132773Homo sapiens
 Toe1ENSMUSG00000028688Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR006941  Ribonuclease CAF1
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP
 biological_processGO:0070050 neuron cellular homeostasis IMP
 cellular_componentGO:0005623 cell IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
brain apoptotic process increased occurrence , abnormal
Show

 ZFA:0000029 hindbrain hindbrain morphology , abnormal
hindbrain neuron decreased amount , abnormal
hindbrain apoptotic , abnormal
Show

 ZFA:0000100 cerebellum cerebellum morphology , abnormal
cerebellum neuron decreased amount , abnormal
cerebellum apoptotic , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0001114 head head morphology , abnormal
head decreased size , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr