ENSGALG00000010228


Gallus gallus

Features
Gene ID: ENSGALG00000010228
  
Biological name :TOE1
  
Synonyms : target of EGR1, exonuclease / TOE1
  
Possible biological names infered from orthology : Q96GM8 / Q9D2E2 / Target of EGR1 protein 1
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 21108200
Gene end: 21113130
  
Corresponding Affymetrix probe sets: Gga.13088.1.S1_at (Chicken Array)   Gga.19869.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000062646
Ensembl peptide - ENSGALP00000063207
Ensembl peptide - ENSGALP00000016608
Ensembl peptide - ENSGALP00000061397
NCBI entrez gene - 424595     See in Manteia.
RefSeq - XM_422434
swissprot - A0A1L1RWJ0
swissprot - F1N9P8
Ensembl - ENSGALG00000010228
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 toe1ENSDARG00000077544Danio rerio
 TOE1ENSG00000132773Homo sapiens
 Toe1ENSMUSG00000028688Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR006941  Ribonuclease CAF1
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034472 snRNA 3"-end processing IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0000175 3"-5"-exoribonuclease activity IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004535 poly(A)-specific ribonuclease activity IEA
 molecular_functionGO:0017069 snRNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr