ENSDARG00000077573


Danio rerio

Features
Gene ID: ENSDARG00000077573
  
Biological name :tmprss13b
  
Synonyms : tmprss13b / transmembrane protease, serine 13b
  
Possible biological names infered from orthology : Q9BYE2 / TMPRSS13 / transmembrane serine protease 13
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 37888095
Gene end: 37900395
  
Corresponding Affymetrix probe sets: Dr.10015.1.S1_at (Zebrafish Array)   Dr.10015.2.S1_at (Zebrafish Array)   Dr.10015.2.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000079274
Ensembl peptide - ENSDARP00000133251
Ensembl peptide - ENSDARP00000117188
Ensembl peptide - ENSDARP00000079276
NCBI entrez gene - 564693     See in Manteia.
RefSeq - NM_001082844
RefSeq - XM_005165342
RefSeq Peptide - NP_001076313
swissprot - A0A0A0MPS1
swissprot - E7EYC5
swissprot - A5PF55
swissprot - A0A0R4IIT3
ZFIN ID - ZDB-GENE-090309-2
Ensembl - ENSDARG00000077573
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMPRSS13ENSGALG00000021273Gallus gallus
 Q9BYE2ENSG00000137747Homo sapiens
 Tmprss13ENSMUSG00000037129Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmprss13a / transmembrane protease, serine 13a / Q9BYE2* / TMPRSS13* / transmembrane serine protease 13*ENSDARG0000010096948
tmprss2 / transmembrane protease, serine 2 / O15393* / transmembrane serine protease 2*ENSDARG0000009868634
tmprss3a / transmembrane protease, serine 3a / Q8K1T0* / P57727* / TMPRSS3* / transmembrane serine protease 3* / transmembrane protease, serine 3*ENSDARG0000005331533
tmprss4b / transmembrane protease, serine 4b / Q9NRS4* / Q8VCA5* / TMPRSS4* / transmembrane serine protease 4* / Transmembrane protease serine 4 *ENSDARG0000001286028
tmprss4a / transmembrane protease, serine 4a / Q9NRS4* / Q8VCA5* / TMPRSS4* / transmembrane serine protease 4* / Transmembrane protease serine 4 *ENSDARG0000010311728
tmprss5 / transmembrane protease, serine 5 / Q9H3S3* / Q9ER04* / transmembrane serine protease 5* / transmembrane protease, serine 5 (spinesin)*ENSDARG0000008771727
st14a / suppression of tumorigenicity 14 (colon carcinoma) a / ST14* / Q9Y5Y6* / P56677* / suppression of tumorigenicity 14* / suppression of tumorigenicity 14 (colon carcinoma)*ENSDARG0000006117327
zmp:0000001114ENSDARG0000010008826
corin / corin, serine peptidase / Q9Y5Q5* / Q9Z319* / Atrial natriuretic peptide-converting enzyme Atrial natriuretic peptide-converting enzyme, N-terminal propeptide Atrial natriuretic pep...ENSDARG0000010128126
st14b / suppression of tumorigenicity 14 (colon carcinoma) b / ST14* / Q9Y5Y6* / P56677* / suppression of tumorigenicity 14* / suppression of tumorigenicity 14 (colon carcinoma)*ENSDARG0000004465526
tmprss15 / transmembrane protease, serine 15 / P97435* / P98073* / transmembrane serine protease 15*ENSDARG0000007939325
hpn / hepsin / O35453* / P05981* / Serine protease hepsin Serine protease hepsin non-catalytic chain Serine protease hepsin catalytic chain*ENSDARG0000002760925
tmprss9 / transmembrane protease, serine 9 / Q7Z410* / transmembrane serine protease 9*ENSDARG0000002984124
si:dkey-22n8.2 / Q8K1T0* / P57727* / TMPRSS3* / transmembrane serine protease 3* / transmembrane protease, serine 3*ENSDARG0000003654524
CR352265.1ENSDARG0000006275821
zgc:55888ENSDARG0000001653820
CR352265.4 / Q7RTY8* / TMPRSS7* / transmembrane serine protease 7*ENSDARG0000011657514


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR001254  Serine proteases, trypsin domain
 IPR001314  Peptidase S1A, chymotrypsin family
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR009003  Peptidase S1, PA clan
 IPR017448  SRCR-like domain
 IPR018114  Serine proteases, trypsin family, histidine active site
 IPR033116  Serine proteases, trypsin family, serine active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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