ENSDARG00000077677


Danio rerio

Features
Gene ID: ENSDARG00000077677
  
Biological name :pdgfd
  
Synonyms : pdgfd / platelet derived growth factor d
  
Possible biological names infered from orthology : Mus musculus platelet-derived growth factor, D polypeptide (Pdgfd), transcript variant 2, mRNA. / Q925I7 / Q9GZP0
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 44929497
Gene end: 44995151
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100961
swissprot - E7F2Z0
ZFIN ID - ZDB-GENE-071217-1
Ensembl - ENSDARG00000077677
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDGFDENSGALG00000017179Gallus gallus
 PDGFDENSG00000170962Homo sapiens
 PdgfdENSMUSG00000032006Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pdgfc / platelet derived growth factor c / Q8CI19* / Q9NRA1* / platelet-derived growth factor, C polypeptide*ENSDARG0000007758835


Protein motifs (from Interpro)
Interpro ID Name
 IPR000072  PDGF/VEGF domain
 IPR000859  CUB domain
 IPR027123  Platelet-derived growth factor D
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007596 blood coagulation IBA
 biological_processGO:0008284 positive regulation of cell proliferation IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0014068 positive regulation of phosphatidylinositol 3-kinase signaling IBA
 biological_processGO:0030335 positive regulation of cell migration IBA
 biological_processGO:0031954 positive regulation of protein autophosphorylation IBA
 biological_processGO:0043406 positive regulation of MAP kinase activity IBA
 biological_processGO:0048008 platelet-derived growth factor receptor signaling pathway IBA
 biological_processGO:0070374 positive regulation of ERK1 and ERK2 cascade IBA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005161 platelet-derived growth factor receptor binding IEA
 molecular_functionGO:0008083 growth factor activity IEA


Pathways (from Reactome)
Pathway description
Signaling by PDGF


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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