ENSDARG00000077777


Danio rerio

Features
Gene ID: ENSDARG00000077777
  
Biological name :tmsb4x
  
Synonyms : thymosin, beta 4 x / tmsb4x
  
Possible biological names infered from orthology : O14604 / P20065 / P62328 / thymosin, beta 4, X chromosome / thymosin beta 4, X-linked / thymosin beta 4, Y-linked / TMSB4Y
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 54178475
Gene end: 54180059
  
Corresponding Affymetrix probe sets: Dr.994.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000095248
Ensembl peptide - ENSDARP00000154847
NCBI entrez gene - 793949     See in Manteia.
RefSeq - NM_001130697
RefSeq Peptide - NP_001124169
swissprot - Q45QT2
ZFIN ID - ZDB-GENE-030131-8304
Ensembl - ENSDARG00000077777
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000026383Gallus gallus
 O14604ENSG00000154620Homo sapiens
 P62328ENSG00000205542Homo sapiens
 P20065ENSMUSG00000049775Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmsb / Q9W7M8 / thymosin, betaENSDARG0000005491177
si:dkey-167i21.2ENSDARG0000009388666
tmsb1 / thymosin beta 1 / P0CG34* / P0CG35* / Tmsb15l* / TMSB15A* / TMSB15B* / Tmsb15b2* / Tmsb15b1* / thymosin beta 15B* / thymosin beta 15a* / thymosin beta 15b2* / thymosin beta 15b like*ENSDARG0000010418164


Protein motifs (from Interpro)
Interpro ID Name
 IPR001152  Beta-thymosin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0003181 atrioventricular valve morphogenesis IMP
 biological_processGO:0007015 actin filament organization IEA
 biological_processGO:0036302 atrioventricular canal development IMP
 molecular_functionGO:0003785 actin monomer binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000114 heart heart linear , abnormal
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 ZFA:0001315 atrioventricular canal atrioventricular canal malformed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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