ENSDARG00000077847


Danio rerio

Features
Gene ID: ENSDARG00000077847
  
Biological name :olfm2a
  
Synonyms : olfactomedin 2a / olfm2a
  
Possible biological names infered from orthology : O95897 / olfactomedin 2 / OLFM2 / Q8BM13
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 54012708
Gene end: 54238460
  
Corresponding Affymetrix probe sets: Dr.10562.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129003
Ensembl peptide - ENSDARP00000143588
Ensembl peptide - ENSDARP00000104138
NCBI entrez gene - 334035     See in Manteia.
RefSeq - XM_005163746
swissprot - A0A286Y8W4
swissprot - F1R5K6
swissprot - X1WFJ9
ZFIN ID - ZDB-GENE-040426-2882
Ensembl - ENSDARG00000077847
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OLFM2ENSG00000105088Homo sapiens
 Olfm2ENSMUSG00000032172Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
olfm1b / olfactomedin 1b / OLFM1* / O88998* / Q99784* / olfactomedin 1*ENSDARG0000001405361
olfm1a / olfactomedin 1a / OLFM1* / O88998* / Q99784* / olfactomedin 1*ENSDARG0000001827060
olfm3a / olfactomedin 3a / OLFM3* / P63056* / Q96PB7* / olfactomedin 3*ENSDARG0000007149358
olfm3b / olfactomedin 3b / OLFM3* / P63056* / Q96PB7* / olfactomedin 3*ENSDARG0000003917456
olfm2b / olfactomedin 2b / OLFM2* / O95897* / Q8BM13* / olfactomedin 2*ENSDARG0000010282556
myoc / myocilin / Q99972*ENSDARG0000002178927
olfml2ba / olfactomedin-like 2Ba / Q68BL8* / Q3V1G4* / OLFML2B* / olfactomedin like 2B* / Olfactomedin-like protein 2B *ENSDARG0000000571626
olfml2bb / olfactomedin-like 2Bb / Q68BL8* / Q3V1G4* / OLFML2B* / olfactomedin like 2B* / Olfactomedin-like protein 2B *ENSDARG0000002148025
olfml2a / olfactomedin-like 2A / Q68BL7* / Q8BHP7*ENSDARG0000000564825
si:ch211-173a9.6 / Olfm5* / OLFM4* / Q3UZZ4* / Q6UX06* / olfactomedin 4* / olfactomedin 5* / Mus musculus olfactomedin 4 (Olfm4), mRNA.*ENSDARG0000004196019
si:ch211-173a9.7 / si:ch211-173a9.6 / Olfm5* / OLFM4* / Q3UZZ4* / Q6UX06* / olfactomedin 4* / olfactomedin 5* / Mus musculus olfactomedin 4 (Olfm4), mRNA.*ENSDARG0000008762519
CABZ01074363.1ENSDARG0000011353319
si:ch211-194m7.8ENSDARG0000010494718
si:ch211-147m6.2 / si:ch211-194m7.3ENSDARG0000007432217
Q29RB4 / olfml3b / olfactomedin-like 3b / OLFML3* / Q9NRN5* / olfactomedin like 3*ENSDARG0000006217117
si:ch211-194m7.5ENSDARG0000009879917
olfml3a / olfactomedin-like 3a / OLFML3* / Q9NRN5* / olfactomedin like 3*ENSDARG0000006185217
gldn / gliomedin / Q6ZMI3* / Q8BMF8* / Gliomedin Gliomedin shedded ectodomain*ENSDARG0000006157616
si:ch211-147m6.1ENSDARG0000010964815
si:ch211-194m7.4ENSDARG0000011188215


Protein motifs (from Interpro)
Interpro ID Name
 IPR003112  Olfactomedin-like domain
 IPR022082  Noelin domain
 IPR031219  Noelin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0014032 neural crest cell development IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000013 cranial ganglion cranial ganglion decreased size , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary shape , abnormal
midbrain hindbrain boundary decreased thickness , abnormal
Show

 ZFA:0000069 rhombomere 6 rhombomere 6 cranial neural crest cell decreased amount , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000110 fourth ventricle fourth ventricle edematous , abnormal
Show

 ZFA:0000130 olfactory pit olfactory pit decreased size , abnormal
Show

 ZFA:0000445 optic tectum optic tectum decreased size , abnormal
Show

 ZFA:0000547 mouth mouth malformed , abnormal
Show

 ZFA:0000641 cranial nerve cranial nerve morphology , abnormal
Show

 ZFA:0001027 oral cavity oral cavity mislocalised posteriorly , abnormal
Show

 ZFA:0001106 pharyngeal pouch pharyngeal pouch morphology , abnormal
Show

 ZFA:0001306 pharyngeal arch pharyngeal arch aplastic , abnormal
Show

 ZFA:0001365 trigeminal motor nucleus trigeminal motor nucleus fused with trigeminal motor nucleus , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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