ENSDARG00000014053


Danio rerio

Features
Gene ID: ENSDARG00000014053
  
Biological name :olfm1b
  
Synonyms : olfactomedin 1b / olfm1b
  
Possible biological names infered from orthology : O88998 / olfactomedin 1 / OLFM1 / Q99784
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 6751405
Gene end: 6813561
  
Corresponding Affymetrix probe sets: Dr.6787.1.S1_at (Zebrafish Array)   NM_001003486_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000031076
Ensembl peptide - ENSDARP00000119769
Ensembl peptide - ENSDARP00000117881
Ensembl peptide - ENSDARP00000117426
Ensembl peptide - ENSDARP00000113685
NCBI entrez gene - 445092     See in Manteia.
RefSeq - NM_001328415
RefSeq - NM_001003486
RefSeq - NM_001328414
RefSeq Peptide - NP_001003486
RefSeq Peptide - NP_001315343
RefSeq Peptide - NP_001315344
swissprot - B7ZD18
swissprot - B7ZD17
swissprot - B7ZD16
swissprot - B7ZD15
swissprot - Q6DBT0
ZFIN ID - ZDB-GENE-040801-228
Ensembl - ENSDARG00000014053
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OLFM1ENSGALG00000002515Gallus gallus
 OLFM1ENSG00000130558Homo sapiens
 Olfm1ENSMUSG00000026833Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
olfm1a / olfactomedin 1a / OLFM1* / O88998* / Q99784* / olfactomedin 1*ENSDARG0000001827089
olfm2a / olfactomedin 2a / OLFM2* / O95897* / olfactomedin 2*ENSDARG0000007784761
olfm3a / olfactomedin 3a / OLFM3* / P63056* / Q96PB7* / olfactomedin 3*ENSDARG0000007149356
olfm3b / olfactomedin 3b / OLFM3* / P63056* / Q96PB7* / olfactomedin 3*ENSDARG0000003917454
olfm2b / olfactomedin 2b / OLFM2* / O95897* / Q8BM13* / olfactomedin 2*ENSDARG0000010282544
olfml2ba / olfactomedin-like 2Ba / Q68BL8* / Q3V1G4* / OLFML2B* / olfactomedin like 2B* / Olfactomedin-like protein 2B *ENSDARG0000000571626
olfml2a / olfactomedin-like 2A / Q68BL7* / Q8BHP7*ENSDARG0000000564825
olfml2bb / olfactomedin-like 2Bb / Q68BL8* / Q3V1G4* / OLFML2B* / olfactomedin like 2B* / Olfactomedin-like protein 2B *ENSDARG0000002148024
myoc / myocilin / Q99972*ENSDARG0000002178924
Q29RB4 / olfml3b / olfactomedin-like 3b / OLFML3* / Q9NRN5* / olfactomedin like 3*ENSDARG0000006217118
si:ch211-173a9.6 / Olfm5* / OLFM4* / Q3UZZ4* / Q6UX06* / olfactomedin 4* / olfactomedin 5* / Mus musculus olfactomedin 4 (Olfm4), mRNA.*ENSDARG0000004196018
si:ch211-147m6.2 / si:ch211-194m7.3ENSDARG0000007432218
CABZ01074363.1ENSDARG0000011353318
si:ch211-194m7.5ENSDARG0000009879917
si:ch211-194m7.8ENSDARG0000010494717
gldn / gliomedin / Q6ZMI3* / Q8BMF8* / Gliomedin Gliomedin shedded ectodomain*ENSDARG0000006157617
si:ch211-173a9.7 / si:ch211-173a9.6 / Olfm5* / OLFM4* / Q3UZZ4* / Q6UX06* / olfactomedin 4* / olfactomedin 5* / Mus musculus olfactomedin 4 (Olfm4), mRNA.*ENSDARG0000008762517
olfml3a / olfactomedin-like 3a / OLFML3* / Q9NRN5* / olfactomedin like 3*ENSDARG0000006185216
si:ch211-147m6.1ENSDARG0000010964813
si:ch211-194m7.4ENSDARG0000011188213


Protein motifs (from Interpro)
Interpro ID Name
 IPR003112  Olfactomedin-like domain
 IPR011044  Quinoprotein amine dehydrogenase, beta chain-like
 IPR022082  Noelin domain
 IPR031217  Noelin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr