ENSMUSG00000026833


Mus musculus

Features
Gene ID: ENSMUSG00000026833
  
Biological name :Olfm1
  
Synonyms : O88998 / olfactomedin 1 / Olfm1
  
Possible biological names infered from orthology : Q99784
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: A3
Gene start: 28192992
Gene end: 28230736
  
Corresponding Affymetrix probe sets: 10470529 (MoGene1.0st)   1425784_a_at (Mouse Genome 430 2.0 Array)   1426562_a_at (Mouse Genome 430 2.0 Array)   1455796_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028177
Ensembl peptide - ENSMUSP00000097815
Ensembl peptide - ENSMUSP00000099943
Ensembl peptide - ENSMUSP00000109553
NCBI entrez gene - 56177     See in Manteia.
MGI - MGI:1860437
RefSeq - NM_001038612
RefSeq - NM_001038613
RefSeq - NM_019498
RefSeq Peptide - NP_001033702
RefSeq Peptide - NP_001033701
RefSeq Peptide - NP_062371
swissprot - O88998
swissprot - A3KGE4
swissprot - Q8R357
swissprot - G3X9Q7
Ensembl - ENSMUSG00000026833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 olfm1aENSDARG00000018270Danio rerio
 olfm1bENSDARG00000014053Danio rerio
 OLFM1ENSGALG00000002515Gallus gallus
 OLFM1ENSG00000130558Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Olfm3 / P63056 / olfactomedin 3 / Q96PB7*ENSMUSG0000002796566
Olfm2 / Q8BM13 / olfactomedin 2 / O95897*ENSMUSG0000003217252
Myoc / O70624 / myocilin / Q99972*ENSMUSG0000002669730
Q3V1G4 / Olfml2b / Olfactomedin-like protein 2B / Q68BL8* / olfactomedin like 2B*ENSMUSG0000003846327
Q8BHP7 / Olfml2a / olfactomedin-like 2A / Q68BL7*ENSMUSG0000004661826
Olfm4 / Q3UZZ4 / Mus musculus olfactomedin 4 (Olfm4), mRNA. / Q6UX06* / olfactomedin 4*ENSMUSG0000002202622
Olfm5 / olfactomedin 5ENSMUSG0000004426521
Gldn / Q8BMF8 / Gliomedin Gliomedin shedded ectodomain / Q6ZMI3* / gliomedin*ENSMUSG0000004616720
Olfml3 / olfactomedin like 3 / Q9NRN5*ENSMUSG0000002784818
Olfml1 / olfactomedin-like 1 / Q6UWY5*ENSMUSG000000510418


Protein motifs (from Interpro)
Interpro ID Name
 IPR003112  Olfactomedin-like domain
 IPR010980  Cytochrome c/b562
 IPR011044  Quinoprotein amine dehydrogenase, beta chain-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR022082  Noelin domain
 IPR031217  Noelin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003190 atrioventricular valve formation ISS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0010628 positive regulation of gene expression ISS
 biological_processGO:0010629 negative regulation of gene expression ISS
 biological_processGO:0010718 positive regulation of epithelial to mesenchymal transition ISS
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:0023041 neuronal signal transduction IDA
 biological_processGO:0030516 regulation of axon extension IDA
 biological_processGO:0051259 protein complex oligomerization IDA
 biological_processGO:0060317 cardiac epithelial to mesenchymal transition ISS
 biological_processGO:1902003 regulation of amyloid-beta formation IDA
 biological_processGO:1902430 negative regulation of amyloid-beta formation IDA
 biological_processGO:2001223 negative regulation of neuron migration IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0032281 AMPA glutamate receptor complex IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043025 neuronal cell body IDA
 cellular_componentGO:0043204 perikaryon IEA
 cellular_componentGO:0044295 axonal growth cone IDA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0097060 synaptic membrane IDA
 molecular_functionGO:0001540 amyloid-beta binding IDA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0009055 electron transfer activity IEA
 molecular_functionGO:0020037 heme binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001921 reduced fertility "diminished ability to produce live offspring" [J:65030]
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Allelic Composition: Nanos2tm1Ysa/Nanos2tm1Ysa
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

 MP:0006058 decreased cerebral infarction size "decreased size of necrotic area of the cerebrum resulting from a sudden insufficiency of arterial or venous blood supply " [RGD:Rat Genome Database submission, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Nanos2tm1Ysa/Nanos2tm1Ysa
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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