ENSDARG00000078185


Danio rerio

Features
Gene ID: ENSDARG00000078185
  
Biological name :pacs2
  
Synonyms : pacs2 / phosphofurin acidic cluster sorting protein 2
  
Possible biological names infered from orthology : Q3V3Q7 / Q86VP3
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 36446187
Gene end: 36525982
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100109
NCBI entrez gene - 794778     See in Manteia.
RefSeq - NM_001122751
RefSeq Peptide - NP_001116223
swissprot - F1RCJ9
ZFIN ID - ZDB-GENE-081218-1
Ensembl - ENSDARG00000078185
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PACS2ENSGALG00000033328Gallus gallus
 PACS2ENSG00000179364Homo sapiens
 Pacs2ENSMUSG00000021143Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-126j24.1ENSDARG0000009864456
pacs1a / phosphofurin acidic cluster sorting protein 1aENSDARG0000004455651
LT631684.1ENSDARG0000010832641


Protein motifs (from Interpro)
Interpro ID Name
 IPR019381  Phosphofurin acidic cluster sorting protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism semi-lethal (sensu genetics) , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr