ENSG00000179364


Homo sapiens

Features
Gene ID: ENSG00000179364
  
Biological name :PACS2
  
Synonyms : PACS2 / phosphofurin acidic cluster sorting protein 2 / Q86VP3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: 1
Band: q32.33
Gene start: 105300563
Gene end: 105398147
  
Corresponding Affymetrix probe sets: 1555823_at (Human Genome U133 Plus 2.0 Array)   1555824_a_at (Human Genome U133 Plus 2.0 Array)   212778_at (Human Genome U133 Plus 2.0 Array)   34406_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000393524
Ensembl peptide - ENSP00000447229
Ensembl peptide - ENSP00000449525
Ensembl peptide - ENSP00000321834
Ensembl peptide - ENSP00000393559
NCBI entrez gene - 23241     See in Manteia.
OMIM - 610423
RefSeq - XM_017021112
RefSeq - XM_017021106
RefSeq - XM_017021107
RefSeq - XM_017021108
RefSeq - XM_017021109
RefSeq - XM_017021110
RefSeq - XM_017021111
RefSeq - NM_001100913
RefSeq - NM_001243127
RefSeq - NM_015197
RefSeq - XM_006720090
RefSeq - XM_006720091
RefSeq - XM_006720092
RefSeq - XM_017021105
RefSeq Peptide - NP_056012
RefSeq Peptide - NP_001094383
RefSeq Peptide - NP_001230056
swissprot - F8W0B1
swissprot - Q86VP3
swissprot - F8VW41
Ensembl - ENSG00000179364
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pacs2ENSDARG00000078185Danio rerio
 PACS2ENSGALG00000033328Gallus gallus
 Pacs2ENSMUSG00000021143Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PACS1 / Q6VY07 / phosphofurin acidic cluster sorting protein 1ENSG0000017511555


Protein motifs (from Interpro)
Interpro ID Name
 IPR019381  Phosphofurin acidic cluster sorting protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IDA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0016032 viral process IEA
 biological_processGO:0034497 protein localization to phagophore assembly site IDA
 biological_processGO:0072659 protein localization to plasma membrane IMP
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 molecular_functionGO:0044325 ion channel binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr