ENSDARG00000078425


Danio rerio

Features
Gene ID: ENSDARG00000078425
  
Biological name :oat
  
Synonyms : oat / ornithine aminotransferase
  
Possible biological names infered from orthology : P04181 / P29758
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 46960579
Gene end: 47042081
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097524
Ensembl peptide - ENSDARP00000125055
NCBI entrez gene - 572518     See in Manteia.
swissprot - F1QV62
swissprot - F8W5L3
ZFIN ID - ZDB-GENE-110411-148
Ensembl - ENSDARG00000078425
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OATENSGALG00000031158Gallus gallus
 OATENSG00000065154Homo sapiens
 OatENSMUSG00000030934Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005814  Aminotransferase class-III
 IPR010164  Ornithine aminotransferase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR034758  Ornithine aminotransferase, mitochondrial


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004587 ornithine-oxo-acid transaminase activity IEA
 molecular_functionGO:0008483 transaminase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IBA
 molecular_functionGO:0042802 identical protein binding IBA


Pathways (from Reactome)
Pathway description
Amino acid synthesis and interconversion (transamination)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000078425 oat / ornithine aminotransferase / P04181* / P29758*  / complex






 

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contact: otassy@igbmc.fr