ENSDARG00000078643


Danio rerio

Features
Gene ID: ENSDARG00000078643
  
Biological name :vtcn1
  
Synonyms : V-set domain containing T cell activation inhibitor 1 / vtcn1
  
Possible biological names infered from orthology : Q7TSP5 / Q7Z7D3
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 20519846
Gene end: 20524673
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101000
Ensembl peptide - ENSDARP00000114047
swissprot - E7FD88
swissprot - E9QDF0
ZFIN ID - ZDB-GENE-070912-388
Ensembl - ENSDARG00000078643
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000014820Gallus gallus
 VTCN1ENSG00000134258Homo sapiens
 Vtcn1ENSMUSG00000051076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cd276 / CD276 molecule / Q5ZPR3* / Q8VE98* / CD276 antigen *ENSDARG0000000306128
hhla2a.2 / HERV-H LTR-associating 2a, tandem duplicate 2 / HHLA2* / Q9UM44* / HERV-H LTR-associating 2*ENSDARG0000000476321
zgc:153911ENSDARG0000000250918
hhla2b.1 / HERV-H LTR-associating 2b, tandem duplicate 1 / HHLA2* / Q9UM44* / HERV-H LTR-associating 2*ENSDARG0000008868018
hhla2b.2 / HERV-H LTR-associating 2b, tandem duplicate 2 / HHLA2* / Q9UM44* / HERV-H LTR-associating 2*ENSDARG0000008625418
CR376783.1ENSDARG0000007423518
si:dkey-71p21.13ENSDARG0000007613916
zgc:172120ENSDARG0000006919916
si:ch211-67f13.8ENSDARG0000007915514
hhla2a.1 / HERV-H LTR-associating 2a, tandem duplicate 1 / HHLA2* / Q9UM44* / HERV-H LTR-associating 2*ENSDARG0000004318212


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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