ENSDARG00000078772


Danio rerio

Features
Gene ID: ENSDARG00000078772
  
Biological name :nbr1b
  
Synonyms : nbr1b / neighbor of brca1 gene 1b
  
Possible biological names infered from orthology : NBR1 / NBR1, autophagy cargo receptor / neighbor of Brca1 gene 1 / P97432 / Q14596
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 32933663
Gene end: 32952050
  
Corresponding Affymetrix probe sets: Dr.12661.1.A1_at (Zebrafish Array)   Dr.12661.2.S1_at (Zebrafish Array)   Dr.17123.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000104318
NCBI entrez gene - 555713     See in Manteia.
RefSeq - XM_001922956
swissprot - F1R2I7
ZFIN ID - ZDB-GENE-170215-1
Ensembl - ENSDARG00000078772
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NBR1ENSGALG00000002765Gallus gallus
 NBR1ENSG00000188554Homo sapiens
 Nbr1ENSMUSG00000017119Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nbr1a / neighbor of brca1 gene 1a / NBR1* / Q14596* / P97432* / neighbor of Brca1 gene 1* / NBR1, autophagy cargo receptor*ENSDARG0000007729744


Protein motifs (from Interpro)
Interpro ID Name
 IPR000270  PB1 domain
 IPR009060  UBA-like superfamily
 IPR032350  Next to BRCA1, central domain
 IPR034852  NBR1, PB1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016236 macroautophagy IBA
 cellular_componentGO:0000407 phagophore assembly site IBA
 cellular_componentGO:0005776 autophagosome IBA
 molecular_functionGO:0043130 ubiquitin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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