ENSGALG00000002765


Gallus gallus

Features
Gene ID: ENSGALG00000002765
  
Biological name :NBR1
  
Synonyms : NBR1 / NBR1, autophagy cargo receptor
  
Possible biological names infered from orthology : neighbor of Brca1 gene 1 / P97432 / Q14596
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 5594511
Gene end: 5612269
  
Corresponding Affymetrix probe sets: Gga.16114.1.S1_at (Chicken Array)   Gga.9984.1.S1_s_at (Chicken Array)   GgaAffx.25616.1.S1_s_at (Chicken Array)   GgaAffx.25616.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004357
NCBI entrez gene - 420007     See in Manteia.
RefSeq - XM_004948641
RefSeq - XM_004948642
RefSeq - XM_015299612
RefSeq - XM_418128
RefSeq - XM_004948640
swissprot - E1C6F8
Ensembl - ENSGALG00000002765
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nbr1aENSDARG00000077297Danio rerio
 nbr1bENSDARG00000078772Danio rerio
 NBR1ENSG00000188554Homo sapiens
 Nbr1ENSMUSG00000017119Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000270  PB1 domain
 IPR000433  Zinc finger, ZZ-type
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR032350  Next to BRCA1, central domain
 IPR033513  Next to BRCA1 gene 1 protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016236 macroautophagy IEA
 biological_processGO:0030500 regulation of bone mineralization IEA
 biological_processGO:0032872 regulation of stress-activated MAPK cascade IEA
 biological_processGO:0045668 negative regulation of osteoblast differentiation IEA
 biological_processGO:0051259 protein complex oligomerization IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043130 ubiquitin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051019 mitogen-activated protein kinase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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