ENSDARG00000079467


Danio rerio

Features
Gene ID: ENSDARG00000079467
  
Biological name :si:ch73-15b2.5
  
Synonyms : si:ch73-15b2.5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 40563848
Gene end: 40572550
  
Corresponding Affymetrix probe sets: Dr.6236.1.A1_at (Zebrafish Array)   XM_681781_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000128029
Ensembl peptide - ENSDARP00000154597
NCBI entrez gene - 558551     See in Manteia.
RefSeq - XM_681781
swissprot - X1WCT2
ZFIN ID - ZDB-GENE-030131-5406
Ensembl - ENSDARG00000079467
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arhgef19 / Rho guanine nucleotide exchange factor (GEF) 19 / Q8BWA8* / Q8IW93* / Rho guanine nucleotide exchange factor 19*ENSDARG0000007885332
arhgef15 / Rho guanine nucleotide exchange factor (GEF) 15 / O94989* / Q5FWH6* / Rho guanine nucleotide exchange factor 15*ENSDARG0000010029327
si:dkey-38p12.3 / O94989* / Q5FWH6* / ARHGEF15* / Rho guanine nucleotide exchange factor 15*ENSDARG0000006184426
ngef / neuronal guanine nucleotide exchange factor / Q8CHT1* / Q8N5V2* / Ephexin-1 *ENSDARG0000007617925
arhgef16 / Rho guanine nucleotide exchange factor (GEF) 16 / Q3U5C8* / Q5VV41* / Rho guanine nucleotide exchange factor 16*ENSDARG0000007711421


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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