ENSDARG00000077114


Danio rerio

Features
Gene ID: ENSDARG00000077114
  
Biological name :arhgef16
  
Synonyms : arhgef16 / Rho guanine nucleotide exchange factor (GEF) 16
  
Possible biological names infered from orthology : Q3U5C8 / Q5VV41 / Rho guanine nucleotide exchange factor 16
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 47099033
Gene end: 47143828
  
Corresponding Affymetrix probe sets: Dr.20642.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000101268
Ensembl peptide - ENSDARP00000112801
NCBI entrez gene - 567180     See in Manteia.
swissprot - B0S4U0
swissprot - E9QGJ1
ZFIN ID - ZDB-GENE-081104-446
Ensembl - ENSDARG00000077114
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARHGEF16ENSGALG00000001058Gallus gallus
 Q5VV41ENSG00000130762Homo sapiens
 Q3U5C8ENSMUSG00000029032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-38p12.3 / O94989* / Q5FWH6* / ARHGEF15* / Rho guanine nucleotide exchange factor 15*ENSDARG0000006184425
arhgef15 / Rho guanine nucleotide exchange factor (GEF) 15 / O94989* / Q5FWH6* / Rho guanine nucleotide exchange factor 15*ENSDARG0000010029324
ngef / neuronal guanine nucleotide exchange factor / Q8CHT1* / Q8N5V2* / Ephexin-1 *ENSDARG0000007617924
arhgef19 / Rho guanine nucleotide exchange factor (GEF) 19 / Q8BWA8* / Q8IW93* / Rho guanine nucleotide exchange factor 19*ENSDARG0000007885324
si:ch73-15b2.5ENSDARG0000007946718


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
NRAGE signals death through JNK
Rho GTPase cycle
G alpha (12/13) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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