ENSGALG00000001058


Gallus gallus

Features
Gene ID: ENSGALG00000001058
  
Biological name :ARHGEF16
  
Synonyms : ARHGEF16 / Rho guanine nucleotide exchange factor 16
  
Possible biological names infered from orthology : Q3U5C8 / Q5VV41
  
Species: Gallus gallus
  
Chr. number: 21
Strand: -1
Band:
Gene start: 1013086
Gene end: 1019368
  
Corresponding Affymetrix probe sets: Gga.10015.1.S1_at (Chicken Array)   Gga.15750.1.S1_at (Chicken Array)   Gga.15750.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001583
NCBI entrez gene - 419386     See in Manteia.
RefSeq - XM_004947371
RefSeq - XM_004947372
RefSeq - XM_417549
swissprot - E1BQT7
Ensembl - ENSGALG00000001058
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arhgef16ENSDARG00000077114Danio rerio
 Q5VV41ENSG00000130762Homo sapiens
 Q3U5C8ENSMUSG00000029032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARHGEF26 / Rho guanine nucleotide exchange factor 26 / Q96DR7* / Rho guanine nucleotide exchange factor (GEF) 26*ENSGALG0000001035248
NGEF / neuronal guanine nucleotide exchange factor / Q8CHT1* / Q8N5V2* / Ephexin-1 *ENSGALG0000003632730
E9Q7D5* / Q12774* / ARHGEF5* / Rho guanine nucleotide exchange factor 5*ENSGALG0000001727627


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR001452  SH3 domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0060326 cell chemotaxis IEA
 biological_processGO:0090630 activation of GTPase activity IEA
 biological_processGO:1903078 positive regulation of protein localization to plasma membrane IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0017048 Rho GTPase binding IEA
 molecular_functionGO:0030165 PDZ domain binding IEA
 molecular_functionGO:0030971 receptor tyrosine kinase binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
NRAGE signals death through JNK
Rho GTPase cycle
G alpha (12/13) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr