ENSDARG00000079651


Danio rerio

Features
Gene ID: ENSDARG00000079651
  
Biological name :si:ch1073-174d20.2
  
Synonyms : si:ch1073-174d20.2
  
Possible biological names infered from orthology : Afg3l1 / AFG3-like protein 1 / Q920A7
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 37142582
Gene end: 37160606
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127080
NCBI entrez gene - 570430     See in Manteia.
RefSeq - XM_005163207
swissprot - E7F6D6
ZFIN ID - ZDB-GENE-121214-51
Ensembl - ENSDARG00000079651
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Afg3l1ENSMUSG00000031967Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
afg3l2 / AFG3-like AAA ATPase 2 / Q9Y4W6* / AFG3 like matrix AAA peptidase subunit 2*ENSDARG0000006227270
spg7 / spastic paraplegia 7 / Q9UQ90* / Q3ULF4* / Paraplegin * / SPG7, paraplegin matrix AAA peptidase subunit*ENSDARG0000006818731


Protein motifs (from Interpro)
Interpro ID Name
 IPR000642  Peptidase M41
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR005936  Peptidase, FtsH
 IPR011546  Peptidase M41, FtsH extracellular
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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