ENSDARG00000079738


Danio rerio

Features
Gene ID: ENSDARG00000079738
  
Biological name :znf219
  
Synonyms : F1QQA8 / zinc finger protein 219 / znf219
  
Possible biological names infered from orthology : Q6IQX8 / Q9P2Y4 / Zfp219
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 73593814
Gene end: 73620363
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097852
swissprot - F1QQA8
ZFIN ID - ZDB-GENE-110623-1
Ensembl - ENSDARG00000079738
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9P2Y4ENSG00000165804Homo sapiens
 Q6IQX8ENSMUSG00000049295Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
znf536 / zinc finger protein 536 / O15090* / Q8K083* / Zfp536*ENSDARG0000010364828
znf516 / zinc finger protein 516 / Q7TSH3* / Q92618* / Zfp516*ENSDARG0000007080912
znf217 / zinc finger protein 217 / O75362*ENSDARG0000008812312


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0030903 notochord development IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IMP
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000135 notochord notochord curved , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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