ENSDARG00000079900


Danio rerio

Features
Gene ID: ENSDARG00000079900
  
Biological name :shroom4
  
Synonyms : shroom4 / shroom family member 4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 24729558
Gene end: 24813020
  
Corresponding Affymetrix probe sets: Dr.6673.1.A1_at (Zebrafish Array)   XM_682334_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000103889
Ensembl peptide - ENSDARP00000136569
NCBI entrez gene - 559035     See in Manteia.
RefSeq - XM_005172333
RefSeq - XM_682334
swissprot - F1Q6C1
swissprot - B3DGK9
ZFIN ID - ZDB-GENE-041111-246
Ensembl - ENSDARG00000079900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
shroom3 / shroom family member 3 / Q8TF72*ENSDARG0000010218053
CABZ01080074.1 / Q13796* / SHROOM2* / shroom family member 2*ENSDARG0000007637141
shroom1 / shroom family member 1 / Q2M3G4* / Q5SX79*ENSDARG000000941816
shroom2a / shroom family member 2a / Q13796* / SHROOM2* / shroom family member 2*ENSDARG000000764160


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR014799  Apx/Shrm Domain 2
 IPR027685  Shroom family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr