ENSDARG00000076371


Danio rerio

Features
Gene ID: ENSDARG00000076371
  
Biological name :CABZ01080074.1
  
Synonyms : CABZ01080074.1
  
Possible biological names infered from orthology : A2ALU4 / Q13796 / SHROOM2 / shroom family member 2
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 44178560
Gene end: 44214767
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102421
Ensembl peptide - ENSDARP00000152410
Ensembl peptide - ENSDARP00000157593
NCBI entrez gene - 556551     See in Manteia.
swissprot - E7F501
Ensembl - ENSDARG00000076371
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SHROOM2ENSGALG00000030802Gallus gallus
 Q13796ENSG00000146950Homo sapiens
 A2ALU4ENSMUSG00000045180Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
shroom3 / shroom family member 3 / Q8TF72*ENSDARG0000010218017
shroom1 / shroom family member 1 / Q2M3G4* / Q5SX79*ENSDARG0000009418115
shroom2a / shroom family member 2a / Q13796* / SHROOM2* / shroom family member 2*ENSDARG000000764167
shroom4 / shroom family member 4ENSDARG000000799003


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR014799  Apx/Shrm Domain 2
 IPR014800  Apx/Shrm Domain 1
 IPR027685  Shroom family
 IPR027686  Shroom2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032401 establishment of melanosome localization IEA
 biological_processGO:0045176 apical protein localization IEA
 cellular_componentGO:0005623 cell IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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