ENSGALG00000030802


Gallus gallus

Features
Gene ID: ENSGALG00000030802
  
Biological name :SHROOM2
  
Synonyms : SHROOM2 / shroom family member 2
  
Possible biological names infered from orthology : A2ALU4 / Q13796
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 125013467
Gene end: 125134159
  
Corresponding Affymetrix probe sets: Gga.19978.1.S1_at (Chicken Array)   GgaAffx.10637.1.S1_at (Chicken Array)   GgaAffx.10638.1.S1_at (Chicken Array)   GgaAffx.20172.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048852
Ensembl peptide - ENSGALP00000055153
Ensembl peptide - ENSGALP00000053863
Ensembl peptide - ENSGALP00000050444
NCBI entrez gene - 418651     See in Manteia.
RefSeq - XM_004938410
swissprot - A0A1D5PQI8
swissprot - A0A1D5PLZ0
swissprot - A0A1D5PCF6
swissprot - A0A1D5P807
Ensembl - ENSGALG00000030802
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01080074.1ENSDARG00000076371Danio rerio
 shroom2aENSDARG00000076416Danio rerio
 Q13796ENSG00000146950Homo sapiens
 A2ALU4ENSMUSG00000045180Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SHROOM4 / shroom family member 4 / Q1W617* / Q9ULL8* / Protein Shroom4 *ENSGALG0000003395315
Q2M3G4* / Q5SX79* / SHROOM1* / shroom family member 1*ENSGALG0000000708014
Q8TF72* / SHROOM3* / shroom family member 3*ENSGALG000000424277


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR014799  Apx/Shrm Domain 2
 IPR014800  Apx/Shrm Domain 1
 IPR027685  Shroom family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032401 establishment of melanosome localization IEA
 biological_processGO:0045176 apical protein localization IEA
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0030864 cortical actin cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr