ENSDARG00000087188


Danio rerio

Features
Gene ID: ENSDARG00000087188
  
Biological name :nfil3-6
  
Synonyms : nfil3-6 / nuclear factor, interleukin 3 regulated, member 6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 14099693
Gene end: 14103551
  
Corresponding Affymetrix probe sets: Dr.17447.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111381
swissprot - F1QIC1
ZFIN ID - ZDB-GENE-040704-63
Ensembl - ENSDARG00000087188
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfil3 / nuclear factor, interleukin 3 regulated / O08750* / Q16649* / Nuclear factor interleukin-3-regulated protein *ENSDARG0000004297727
nfil3-5 / nuclear factor, interleukin 3 regulated, member 5ENSDARG0000009496525
nfil3-3 / nuclear factor, interleukin 3 regulated, member 3ENSDARG0000011694125
nfil3-4 / nuclear factor, interleukin 3 regulated, member 4ENSDARG0000009234619
si:dkey-172o19.2ENSDARG0000007139819
si:dkey-60d5.3ENSDARG0000009708814


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IDA
 biological_processGO:0032922 circadian regulation of gene expression IDA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr