ENSDARG00000094965


Danio rerio

Features
Gene ID: ENSDARG00000094965
  
Biological name :nfil3-5
  
Synonyms : nfil3-5 / nuclear factor, interleukin 3 regulated, member 5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 8172227
Gene end: 8180042
  
Corresponding Affymetrix probe sets: Dr.9920.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117561
Ensembl peptide - ENSDARP00000147013
NCBI entrez gene - 335737     See in Manteia.
RefSeq - XM_005165724
swissprot - F1QZP2
ZFIN ID - ZDB-GENE-030131-7677
Ensembl - ENSDARG00000094965
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfil3 / nuclear factor, interleukin 3 regulated / O08750* / Q16649* / Nuclear factor interleukin-3-regulated protein *ENSDARG0000004297719
nfil3-6 / nuclear factor, interleukin 3 regulated, member 6ENSDARG0000008718814
si:dkey-172o19.2ENSDARG0000007139812
nfil3-4 / nuclear factor, interleukin 3 regulated, member 4ENSDARG0000009234611
nfil3-3 / nuclear factor, interleukin 3 regulated, member 3ENSDARG0000011694110
si:dkey-60d5.3ENSDARG000000970888


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IDA
 biological_processGO:0007623 circadian rhythm IDA
 biological_processGO:0032922 circadian regulation of gene expression IDA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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