ENSDARG00000042977


Danio rerio

Features
Gene ID: ENSDARG00000042977
  
Biological name :nfil3
  
Synonyms : nfil3 / nuclear factor, interleukin 3 regulated
  
Possible biological names infered from orthology : Nuclear factor interleukin-3-regulated protein / O08750 / Q16649
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 5414224
Gene end: 5419256
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119920
NCBI entrez gene - 445509     See in Manteia.
RefSeq - NM_001004120
RefSeq Peptide - NP_001004120
swissprot - F1R7W5
ZFIN ID - ZDB-GENE-040822-28
Ensembl - ENSDARG00000042977
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFIL3ENSGALG00000015209Gallus gallus
 NFIL3ENSG00000165030Homo sapiens
 Nfil3ENSMUSG00000056749Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfil3-5 / nuclear factor, interleukin 3 regulated, member 5ENSDARG0000009496524
nfil3-6 / nuclear factor, interleukin 3 regulated, member 6ENSDARG0000008718820
nfil3-4 / nuclear factor, interleukin 3 regulated, member 4ENSDARG0000009234617
si:dkey-172o19.2ENSDARG0000007139816
nfil3-3 / nuclear factor, interleukin 3 regulated, member 3ENSDARG0000011694116
si:dkey-60d5.3ENSDARG0000009708812


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain
 IPR010533  Vertebrate interleukin-3 regulated transcription factor
 IPR016743  Nuclear factor interleukin-3-regulated protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007623 circadian rhythm IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000094 blood island blood island has fewer parts of type myeloid cell , abnormal
Show

 ZFA:0009356 myeloid lineage restricted progenitor cell myeloid lineage restricted progenitor cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr