Manteia

ENSDARG00000087198

Danio rerio

Features

Gene ID:	ENSDARG00000087198

Biological name :	cthrc1a

Synonyms :	collagen triple helix repeat containing 1a / cthrc1a

Possible biological names infered from orthology :	collagen triple helix repeat containing 1 / Collagen triple helix repeat-containing protein 1 / CTHRC1 / Q96CG8 / Q9D1D6

Species:	Danio rerio

Chr. number:	19
Strand:	1
Band:
Gene start:	12915498
Gene end:	12927089

Corresponding Affymetrix probe sets:	Dr.18064.1.A1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000115065 NCBI entrez gene - 445308 See in Manteia. RefSeq - NM_001003765 RefSeq Peptide - NP_001003765 swissprot - F1Q7G0 ZFIN ID - ZDB-GENE-040808-22 Ensembl - ENSDARG00000087198

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
cthrc1b / collagen triple helix repeat containing 1b / Q9D1D6* / CTHRC1* / Q96CG8* / collagen triple helix repeat containing 1* / Collagen triple helix repeat-containing protein 1 *	ENSDARG00000001971	72

Protein motifs (from Interpro)

Interpro ID	Name
IPR008160	Collagen triple helix repeat

Gene Ontology (GO)

Type

GO ID

Term

Ev.Code

No match

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr