ENSDARG00000087640


Danio rerio

Features
Gene ID: ENSDARG00000087640
  
Biological name :nsfl1c
  
Synonyms : nsfl1c / NSFL1 (p97) cofactor (p47)
  
Possible biological names infered from orthology : NSFL1 cofactor / NSFL1 cofactor p47 / Q9CZ44 / Q9UNZ2
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 18790658
Gene end: 18805655
  
Corresponding Affymetrix probe sets: Dr.11758.1.A1_at (Zebrafish Array)   Dr.5439.1.A1_at (Zebrafish Array)   Dr.5439.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115283
Ensembl peptide - ENSDARP00000155350
swissprot - F1Q8D2
ZFIN ID - ZDB-GENE-041114-160
Ensembl - ENSDARG00000087640
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NSFL1CENSGALG00000006182Gallus gallus
 NSFL1CENSG00000088833Homo sapiens
 Nsfl1cENSMUSG00000027455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ubxn2a / UBX domain protein 2A / P68543* / Q99KJ0*ENSDARG0000008718024


Protein motifs (from Interpro)
Interpro ID Name
 IPR001012  UBX domain
 IPR009060  UBA-like superfamily
 IPR012989  SEP domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0007030 Golgi organization IBA
 biological_processGO:0031468 nuclear envelope reassembly IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0061025 membrane fusion IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0019888 protein phosphatase regulator activity IBA
 molecular_functionGO:0043130 ubiquitin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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