ENSG00000088833


Homo sapiens

Features
Gene ID: ENSG00000088833
  
Biological name :NSFL1C
  
Synonyms : NSFL1C / NSFL1 cofactor / Q9UNZ2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p13
Gene start: 1442162
Gene end: 1473842
  
Corresponding Affymetrix probe sets: 217830_s_at (Human Genome U133 Plus 2.0 Array)   217831_s_at (Human Genome U133 Plus 2.0 Array)   220248_x_at (Human Genome U133 Plus 2.0 Array)   232519_at (Human Genome U133 Plus 2.0 Array)   232520_s_at (Human Genome U133 Plus 2.0 Array)   236951_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000473616
Ensembl peptide - ENSP00000452019
Ensembl peptide - ENSP00000473400
Ensembl peptide - ENSP00000216879
Ensembl peptide - ENSP00000338643
Ensembl peptide - ENSP00000418529
Ensembl peptide - ENSP00000434067
Ensembl peptide - ENSP00000451675
NCBI entrez gene - 55968     See in Manteia.
OMIM - 606610
RefSeq - XM_017027957
RefSeq - XM_006723593
RefSeq - XM_006723594
RefSeq - XM_011529300
RefSeq - XM_011529301
RefSeq - XM_011529302
RefSeq - XM_011529304
RefSeq - XM_011529305
RefSeq - XM_017027956
RefSeq - NM_001206736
RefSeq - NM_016143
RefSeq - NM_018839
RefSeq - XM_006723592
RefSeq Peptide - NP_057227
RefSeq Peptide - NP_061327
RefSeq Peptide - NP_001193665
swissprot - F2Z2K0
swissprot - G3V4V8
swissprot - Q9UNZ2
swissprot - R4GMY2
swissprot - R4GNE6
Ensembl - ENSG00000088833
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nsfl1cENSDARG00000087640Danio rerio
 NSFL1CENSGALG00000006182Gallus gallus
 Nsfl1cENSMUSG00000027455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q14CS0 / UBXN2B / UBX domain protein 2BENSG0000021511444
P68543 / UBXN2A / UBX domain protein 2AENSG0000017396026


Protein motifs (from Interpro)
Interpro ID Name
 IPR001012  UBX domain
 IPR009060  UBA-like superfamily
 IPR012989  SEP domain
 IPR029071  Ubiquitin-like domain superfamily
 IPR036241  NSFL1 cofactor p47, SEP domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0007030 Golgi organization IBA
 biological_processGO:0031468 nuclear envelope reassembly IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0061025 membrane fusion IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005795 Golgi stack IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IDA
 cellular_componentGO:1990730 VCP-NSFL1C complex ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005543 phospholipid binding IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0019888 protein phosphatase regulator activity IBA
 molecular_functionGO:0043130 ubiquitin binding IBA
 molecular_functionGO:0051117 ATPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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