ENSMUSG00000027455


Mus musculus

Features
Gene ID: ENSMUSG00000027455
  
Biological name :Nsfl1c
  
Synonyms : Nsfl1c / NSFL1 cofactor p47 / Q9CZ44
  
Possible biological names infered from orthology : NSFL1 cofactor / Q9UNZ2
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: G3
Gene start: 151494182
Gene end: 151511414
  
Corresponding Affymetrix probe sets: 10477006 (MoGene1.0st)   10521813 (MoGene1.0st)   1429328_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028949
Ensembl peptide - ENSMUSP00000086542
Ensembl peptide - ENSMUSP00000099449
NCBI entrez gene - 386649     See in Manteia.
MGI - MGI:3042273
RefSeq - NM_001291074
RefSeq - NM_198326
RefSeq Peptide - NP_001278003
RefSeq Peptide - NP_938085
swissprot - Q9CZ44
swissprot - Q3UVN5
swissprot - A2AT02
Ensembl - ENSMUSG00000027455
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nsfl1cENSDARG00000087640Danio rerio
 NSFL1CENSGALG00000006182Gallus gallus
 NSFL1CENSG00000088833Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q0KL01 / Ubxn2b / UBX domain protein 2B / Q14CS0*ENSMUSG0000002824343
Q99KJ0 / Ubxn2a / UBX domain protein 2A / P68543*ENSMUSG0000002063425


Protein motifs (from Interpro)
Interpro ID Name
 IPR001012  UBX domain
 IPR009060  UBA-like superfamily
 IPR012989  SEP domain
 IPR029071  Ubiquitin-like domain superfamily
 IPR036241  NSFL1 cofactor p47, SEP domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0007030 Golgi organization IBA
 biological_processGO:0031468 nuclear envelope reassembly IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0061025 membrane fusion IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005795 Golgi stack IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0045111 intermediate filament cytoskeleton ISO
 cellular_componentGO:1990730 VCP-NSFL1C complex IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005543 phospholipid binding IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0019888 protein phosphatase regulator activity IBA
 molecular_functionGO:0043130 ubiquitin binding IBA
 molecular_functionGO:0051117 ATPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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