ENSDARG00000090369


Danio rerio

Features
Gene ID: ENSDARG00000090369
  
Biological name :zgc:86896
  
Synonyms : zgc:86896
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 36275633
Gene end: 36286650
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124210
Ensembl peptide - ENSDARP00000154173
Ensembl peptide - ENSDARP00000093657
Ensembl peptide - ENSDARP00000123754
NCBI entrez gene - 415190     See in Manteia.
RefSeq - NM_001002100
RefSeq Peptide - NP_001002100
swissprot - A9JRP8
swissprot - F8W4F0
ZFIN ID - ZDB-GENE-040625-80
Ensembl - ENSDARG00000090369
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arpc1a / actin related protein 2/3 complex, subunit 1A / Q92747* / Q9R0Q6*ENSDARG0000000838366
arpc1b / actin related protein 2/3 complex, subunit 1B / O15143* / Q9WV32*ENSDARG0000002706362


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017383  Actin-related protein 2/3 complex subunit 1
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030833 regulation of actin filament polymerization IEA
 biological_processGO:0034314 Arp2/3 complex-mediated actin nucleation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005885 Arp2/3 protein complex IBA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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