ENSDARG00000090581


Danio rerio

Features
Gene ID: ENSDARG00000090581
  
Biological name :wdr4
  
Synonyms : wdr4 / WD repeat domain 4
  
Possible biological names infered from orthology : P57081
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 19477687
Gene end: 19489264
  
Corresponding Affymetrix probe sets: Dr.15040.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000109363
NCBI entrez gene - 570351     See in Manteia.
swissprot - E7EZ59
ZFIN ID - ZDB-GENE-060810-10
Ensembl - ENSDARG00000090581
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR4ENSGALG00000016187Gallus gallus
 WDR4ENSG00000160193Homo sapiens
 Wdr4ENSMUSG00000024037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR028884  tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0036265 RNA (guanine-N7)-methylation IEA
 biological_processGO:0106004 tRNA (guanine-N7)-methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0043527 tRNA methyltransferase complex IBA
 molecular_functionGO:0008176 tRNA (guanine-N7-)-methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr