ENSDARG00000095981


Danio rerio

Features
Gene ID: ENSDARG00000095981
  
Biological name :si:ch211-161n3.5
  
Synonyms : si:ch211-161n3.5
  
Possible biological names infered from orthology : 5830411N06Rik / CD163 / CD163L1 / CD163 molecule / CD163 molecule like 1 / Q2VLH6 / Q4G0T1 / Q86VB7 / Q9NR16 / RIKEN cDNA 5830411N06 gene / SCART1 / Scavenger receptor cysteine-rich type 1 protein M130 Soluble CD163 / scavenger receptor family member expressed on T cells 1
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 10926171
Gene end: 10931729
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125551
swissprot - H0WFB9
ZFIN ID - ZDB-GENE-110913-81
Ensembl - ENSDARG00000095981
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000046256Gallus gallus
 CD163ENSG00000177575Homo sapiens
 Q4G0T1ENSG00000214279Homo sapiens
 Q9NR16ENSG00000177675Homo sapiens
 5830411N06RikENSMUSG00000054672Mus musculus
 Cd163ENSMUSG00000008845Mus musculus
 Cd163l1ENSMUSG00000025461Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-21h14.8 / CD163* / Q4G0T1* / Q2VLH6* / Q86VB7* / Q9NR16* / SCART1* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06 gene* / scavenger r...ENSDARG0000009608380
BX784029.4 / CD163* / Q4G0T1* / SCART1* / Q9NR16* / Q86VB7* / Q2VLH6* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06 gene* / scavenger recept...ENSDARG0000009618478
si:ch211-161n3.4 / si:ch211-161n3.3 / CD163* / Q86VB7* / Q2VLH6* / Q4G0T1* / Q9NR16* / SCART1* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06...ENSDARG0000009298978
si:dkey-21h14.10 / CD163* / Q4G0T1* / Q2VLH6* / Q86VB7* / Q9NR16* / SCART1* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06 gene* / scavenger ...ENSDARG0000009618777
si:ch211-161n3.4 / CD163* / Q4G0T1* / Q2VLH6* / Q86VB7* / Q9NR16* / SCART1* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06 gene* / scavenger ...ENSDARG0000004575277
BX784029.3 / CD163* / Q4G0T1* / SCART1* / Q9NR16* / Q86VB7* / Q2VLH6* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06 gene* / scavenger recept...ENSDARG0000009615662
si:dkey-21h14.9 / CD163* / Q4G0T1* / Q2VLH6* / Q86VB7* / Q9NR16* / SCART1* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06 gene* / scavenger r...ENSDARG0000009615361
si:dkey-21h14.12 / CD163* / Q4G0T1* / Q2VLH6* / Q86VB7* / Q9NR16* / SCART1* / CD163L1* / 5830411N06Rik* / CD163 molecule* / CD163 molecule like 1* / RIKEN cDNA 5830411N06 gene* / scavenger ...ENSDARG0000009460355
si:dkey-14d8.20ENSDARG0000004583728
CT583642.1ENSDARG0000010101720
prss12 / protease, serine, 12 (neurotrypsin, motopsin) / O08762* / P56730* / serine protease 12*ENSDARG0000006183016
si:ch73-127m5.1ENSDARG0000006068016
si:ch211-51a6.2ENSDARG0000003096716


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR017448  SRCR-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA


Pathways (from Reactome)
Pathway description
Scavenging of heme from plasma


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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