ENSDARG00000096979


Danio rerio

Features
Gene ID: ENSDARG00000096979
  
Biological name :NPC2 (1 of many)
  
Synonyms : NPC2 (1 of many) / zgc:193725
  
Possible biological names infered from orthology : Epididymal secretory protein E1 / NPC2 / NPC intracellular cholesterol transporter 2 / P61916 / Q9Z0J0
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 43021662
Gene end: 43022468
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000014574
NCBI entrez gene - 565099     See in Manteia.
RefSeq - NM_001128719
RefSeq Peptide - NP_001122191
swissprot - B3DFW4
ZFIN ID - ZDB-GENE-080723-11
Ensembl - ENSDARG00000096979
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NPC2ENSGALG00000010237Gallus gallus
 NPC2ENSG00000119655Homo sapiens
 Npc2ENSMUSG00000021242Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
npc2 / Q9DGJ3 / Niemann-Pick disease, type C2 / Q9Z0J0* / P61916* / Epididymal secretory protein E1 * / NPC intracellular cholesterol transporter 2*ENSDARG0000009091291


Protein motifs (from Interpro)
Interpro ID Name
 IPR003172  MD-2-related lipid-recognition domain
 IPR014756  Immunoglobulin E-set
 IPR033916  ML domain, Npc2 like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032367 intracellular cholesterol transport IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
LDL clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000017180 npc1 / Niemann-Pick disease, type C1 / O15118* / O35604* / Niemann-Pick C1 protein * / NPC intracellular cholesterol transporter 1*  / reaction






 

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