ENSDARG00000097539


Danio rerio

Features
Gene ID: ENSDARG00000097539
  
Biological name :si:ch211-39f2.3
  
Synonyms : si:ch211-39f2.3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 38878830
Gene end: 38913459
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129792
NCBI entrez gene - 110437733     See in Manteia.
RefSeq - XM_021480403
swissprot - X1WHS8
ZFIN ID - ZDB-GENE-131126-52
Ensembl - ENSDARG00000097539
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-239b22.1ENSDARG0000003158852
tecta / tectorin alpha / O08523* / O75443*ENSDARG0000005955817
si:dkey-65b12.6 / FCGBP* / 9530053A07Rik* / RIKEN cDNA 9530053A07 gene* / Fc fragment of IgG binding protein*ENSDARG0000007683017
zanl / zonadhesin, like / ZAN* / zonadhesin* / zonadhesin (gene/pseudogene)*ENSDARG0000005678117
muc5.1 / mucin 5.1, oligomeric mucus/gel-forming / MUC5B* / MUC5AC* / P98088* / Q9HC84* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSDARG0000007033113
muc5.3 / mucin 5.3 / MUC5B* / MUC5AC* / P98088* / Q9HC84* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSDARG0000009947012
muc5.2 / mucin 5.2 / MUC5B* / MUC5AC* / P98088* / Q9HC84* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSDARG0000005855612
scospondin / subcommissural organ spondin / SSPO* / Q8CG65* / SCO-spondin*ENSDARG0000006785912
vwf / von Willebrand factor / P04275*ENSDARG0000007723112
otog / otogelin / Q6ZRI0*ENSDARG0000006846012
otogl / otogelin-like / F7A4A7* / Q3ZCN5* / Otogelin-like protein *ENSDARG0000008875011
CABZ01080550.1ENSDARG000001006219


Protein motifs (from Interpro)
Interpro ID Name
 IPR001007  VWFC domain
 IPR001507  Zona pellucida domain
 IPR001846  von Willebrand factor, type D domain
 IPR002919  Trypsin Inhibitor-like, cysteine rich domain
 IPR003886  NIDO domain
 IPR014853  Uncharacterised domain, cysteine-rich
 IPR025615  TILa domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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