ENSDARG00000098114


Danio rerio

Features
Gene ID: ENSDARG00000098114
  
Biological name :ctsa
  
Synonyms : cathepsin A / ctsa
  
Possible biological names infered from orthology : P10619 / P16675
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 55396807
Gene end: 55423220
  
Corresponding Affymetrix probe sets: Dr.3485.1.S1_at (Zebrafish Array)   NM_200550_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000135590
Ensembl peptide - ENSDARP00000138030
NCBI entrez gene - 321818     See in Manteia.
RefSeq - NM_200550
RefSeq Peptide - NP_956844
swissprot - A0A0R4ITW7
swissprot - A0A0R4ILY1
ZFIN ID - ZDB-GENE-030131-537
Ensembl - ENSDARG00000098114
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTSAENSGALG00000006876Gallus gallus
 CTSAENSG00000064601Homo sapiens
 CtsaENSMUSG00000017760Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-122f10.4ENSDARG0000005207449


Protein motifs (from Interpro)
Interpro ID Name
 IPR001563  Peptidase S10, serine carboxypeptidase
 IPR018202  Serine carboxypeptidase, serine active site
 IPR029058  Alpha/Beta hydrolase fold
 IPR033124  Serine carboxypeptidases, histidine active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0004185 serine-type carboxypeptidase activity IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
MHC class II antigen presentation
Sialic acid metabolism
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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