ENSG00000064601


Homo sapiens

Features
Gene ID: ENSG00000064601
  
Biological name :CTSA
  
Synonyms : cathepsin A / CTSA / P10619
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.12
Gene start: 45890144
Gene end: 45898820
  
Corresponding Affymetrix probe sets: 200661_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000493613
Ensembl peptide - ENSP00000475827
Ensembl peptide - ENSP00000476235
Ensembl peptide - ENSP00000191018
Ensembl peptide - ENSP00000346952
Ensembl peptide - ENSP00000361537
Ensembl peptide - ENSP00000361562
Ensembl peptide - ENSP00000408533
Ensembl peptide - ENSP00000475524
NCBI entrez gene - 5476     See in Manteia.
OMIM - 613111
RefSeq - NM_001127695
RefSeq - NM_000308
RefSeq - NM_001167594
RefSeq Peptide - NP_000299
RefSeq Peptide - NP_001121167
RefSeq Peptide - NP_001161066
swissprot - P10619
swissprot - Q5JZH0
swissprot - U3KQ41
swissprot - U3KQF1
swissprot - U3KQU6
swissprot - X6R5C5
swissprot - X6R8A1
Ensembl - ENSG00000064601
  
Related genetic diseases (OMIM): 256540 - Galactosialidosis, 256540
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ctsaENSDARG00000098114Danio rerio
 CTSAENSGALG00000006876Gallus gallus
 CtsaENSMUSG00000017760Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001563  Peptidase S10, serine carboxypeptidase
 IPR018202  Serine carboxypeptidase, serine active site
 IPR029058  Alpha/Beta hydrolase fold
 IPR033124  Serine carboxypeptidases, histidine active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006687 glycosphingolipid metabolic process TAS
 biological_processGO:0006886 intracellular protein transport TAS
 biological_processGO:0031647 regulation of protein stability IMP
 biological_processGO:0043085 positive regulation of catalytic activity IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0051603 proteolysis involved in cellular protein catabolic process IBA
 biological_processGO:1904714 regulation of chaperone-mediated autophagy TAS
 biological_processGO:1904715 negative regulation of chaperone-mediated autophagy IGI
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005764 lysosome NAS
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0098575 lumenal side of lysosomal membrane TAS
 molecular_functionGO:0004180 carboxypeptidase activity IEA
 molecular_functionGO:0004185 serine-type carboxypeptidase activity IEA
 molecular_functionGO:0004308 exo-alpha-sialidase activity TAS
 molecular_functionGO:0008047 enzyme activator activity TAS
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
MHC class II antigen presentation
Sialic acid metabolism
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000365 Hearing loss 
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 HP:0000524 Conjunctival telangiectasia "The presence of small (ca. 0.5-1.0 mm) dilated blood vessels near the surface of the mucous membranes of the conjunctiva." [HPO:curators]
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 HP:0000943 Dysostosis multiplex 
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 HP:0001028 Hemangiomas "The presence of multiple hemangiomas. A hemangioma is a benign tumor characterized by blood-filled spaces lined by benign endothelial cells. A hemangioma characterized by large endothelial spaces (caverns) is called a cavernous hemangioma (in contrast to a hemangioma with small endothelial spaces, which is called capillary hemangioma)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001433 Hepatosplenomegaly 
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 HP:0002652 Skeletal dysplasia 
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 HP:0003468 Abnormalities of the vertebrae 
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0007759 Corneal opacities, not impairing visual acuity 
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 HP:0007957 Variable degree of corneal opacities 
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 HP:0008166 Decreased beta-galactosidase activity 
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 HP:0010729 Cherry red spot of the macula 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000170266 GLB1 / P16278 / galactosidase beta 1  / complex
 ENSG00000064601 CTSA / P10619 / cathepsin A  / complex
 ENSG00000204386 NEU1 / Q99519 / neuraminidase 1  / complex






 

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