ENSDARG00000098687


Danio rerio

Features
Gene ID: ENSDARG00000098687
  
Biological name :pygo1
  
Synonyms : pygo1 / pygopus family PHD finger 1
  
Possible biological names infered from orthology : pygopus 1 / Q9D0P5 / Q9Y3Y4
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 2153530
Gene end: 2160794
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132493
NCBI entrez gene - 797729     See in Manteia.
RefSeq - NM_001113637
RefSeq Peptide - NP_001107109
swissprot - B7ZUU3
ZFIN ID - ZDB-GENE-080204-62
Ensembl - ENSDARG00000098687
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PYGO1ENSGALG00000004369Gallus gallus
 PYGO1ENSG00000171016Homo sapiens
 Pygo1ENSMUSG00000034910Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pygo2 / pygopus homolog 2 (Drosophila) / Q9BRQ0* / pygopus 2* / pygopus family PHD finger 2*ENSDARG0000003677228


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Formation of the beta-catenin:TCF transactivating complex


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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