ENSDARG00000098904


Danio rerio

Features
Gene ID: ENSDARG00000098904
  
Biological name :pex1
  
Synonyms : peroxisomal biogenesis factor 1 / pex1
  
Possible biological names infered from orthology : O43933 / Peroxisome biosis factor 1 / Q5BL07
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 33850705
Gene end: 33876245
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000137115
NCBI entrez gene - 793906     See in Manteia.
RefSeq - NM_001170835
RefSeq Peptide - NP_001164306
swissprot - A0A0R4IPF0
ZFIN ID - ZDB-GENE-070530-1
Ensembl - ENSDARG00000098904
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PEX1ENSGALG00000009410Gallus gallus
 PEX1ENSG00000127980Homo sapiens
 Pex1ENSMUSG00000005907Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR009010  Aspartate decarboxylase-like domain superfamily
 IPR015342  Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel fold
 IPR015343  Peroxisome biogenesis factor 1, N-terminal, alpha/beta
 IPR025653  Peroxisome biogenesis factor 1
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029067  CDC48 domain 2-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006625 protein targeting to peroxisome IEA
 biological_processGO:0007031 peroxisome organization IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005778 peroxisomal membrane IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0042623 ATPase activity, coupled IEA


Pathways (from Reactome)
Pathway description
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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