ENSGALG00000009410


Gallus gallus

Features
Gene ID: ENSGALG00000009410
  
Biological name :PEX1
  
Synonyms : peroxisomal biogenesis factor 1 / PEX1
  
Possible biological names infered from orthology : O43933 / Peroxisome biosis factor 1 / Q5BL07
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 22680879
Gene end: 22702814
  
Corresponding Affymetrix probe sets: Gga.18163.1.S1_at (Chicken Array)   Gga.3423.1.S1_at (Chicken Array)   GgaAffx.22929.1.S1_at (Chicken Array)   GgaAffx.5933.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015313
NCBI entrez gene - 420554     See in Manteia.
RefSeq - XM_004939296
RefSeq - XM_015281941
RefSeq - XM_015281942
RefSeq - XM_418655
RefSeq - XM_004939295
swissprot - E1BY08
Ensembl - ENSGALG00000009410
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pex1ENSDARG00000098904Danio rerio
 PEX1ENSG00000127980Homo sapiens
 Pex1ENSMUSG00000005907Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR009010  Aspartate decarboxylase-like domain superfamily
 IPR015342  Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel fold
 IPR015343  Peroxisome biogenesis factor 1, N-terminal, alpha/beta
 IPR025653  Peroxisome biogenesis factor 1
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029067  CDC48 domain 2-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006625 protein targeting to peroxisome IEA
 biological_processGO:0007031 peroxisome organization IEA
 biological_processGO:0016558 protein import into peroxisome matrix IEA
 biological_processGO:0060152 microtubule-based peroxisome localization IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005778 peroxisomal membrane IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0042623 ATPase activity, coupled IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA


Pathways (from Reactome)
Pathway description
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002151 PEX12 / peroxisomal biogenesis factor 12 / O00623* / Q8VC48* / Peroxisome assembly protein 12 *  / reaction / complex
 ENSGALG00000002836 PEX14 / peroxisomal biogenesis factor 14 / O75381* / Q9R0A0* / Peroxisomal membrane protein PEX14 *  / reaction / complex
 ENSGALG00000007832 PEX13 / peroxisomal biogenesis factor 13 / Q92968* / Q9D0K1* / Peroxisomal membrane protein PEX13 *  / reaction / complex
 ENSGALG00000013874 PEX7 / peroxisomal biogenesis factor 7 / O00628* / P97865* / Peroxisomal targeting signal 2 receptor *  / reaction / complex
 ENSGALG00000006505 ZFAND6 / zinc finger AN1-type containing 6 / Q6FIF0* / Q9DCH6* / zinc finger, AN1-type domain 6*  / complex / reaction
 ENSGALG00000009410 PEX1 / peroxisomal biogenesis factor 1 / O43933* / Q5BL07* / Peroxisome biosis factor 1 *  / complex
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction / complex
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction / complex
 ENSGALG00000035752 PEX2 / peroxisomal biogenesis factor 2 / P28328*  / complex / reaction






 

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