ENSDARG00000100072


Danio rerio

Features
Gene ID: ENSDARG00000100072
  
Biological name :mgrn1a
  
Synonyms : mahogunin, ring finger 1a / mgrn1a
  
Possible biological names infered from orthology : mahogunin ring finger 1 / MGRN1 / Mus musculus mahogunin, ring finger 1 (Mgrn1), transcript variant 3, mRNA. / O60291 / Q9D074
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 20122256
Gene end: 20149558
  
Corresponding Affymetrix probe sets: Dr.20491.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132672
Ensembl peptide - ENSDARP00000148063
Ensembl peptide - ENSDARP00000140478
Ensembl peptide - ENSDARP00000140367
NCBI entrez gene - 793939     See in Manteia.
RefSeq - NM_199879
RefSeq Peptide - NP_956173
swissprot - B7ZVH3
swissprot - B0JZJ6
swissprot - A0A0R4IVV6
ZFIN ID - ZDB-GENE-030131-6192
Ensembl - ENSDARG00000100072
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MGRN1ENSGALG00000037492Gallus gallus
 MGRN1ENSG00000102858Homo sapiens
 Mgrn1ENSMUSG00000022517Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mgrn1b / mahogunin, ring finger 1b / MGRN1* / O60291* / mahogunin ring finger 1*ENSDARG0000000479673
RNF157 / si:dkey-49c17.3 / Q96PX1* / ring finger protein 157*ENSDARG0000005748153


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr